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NUTF2P5 nuclear transport factor 2 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 106481706, updated on 10-Oct-2023

Summary

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Official Symbol
NUTF2P5provided by HGNC
Official Full Name
nuclear transport factor 2 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:50454
See related
Ensembl:ENSG00000215227 AllianceGenome:HGNC:50454
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
10p13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (13870797..13871175)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (13883877..13884257)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (13912797..13913175)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene FERM domain containing 4A Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13749502-13750237 Neighboring gene uncharacterized LOC124902379 Neighboring gene uncharacterized LOC105376426 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13753704-13754570 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr10:13754571-13755435 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3061 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2158 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13770188-13771042 Neighboring gene Sharpr-MPRA regulatory region 15561 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3062 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3063 Neighboring gene RNA, 5S ribosomal pseudogene 301 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3064 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr10:13799977-13801176 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_11339 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3066 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13830309-13830899 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:13868526-13868712 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13912798-13913451 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13922897-13923786 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13923787-13924677 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:13924678-13925567 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3067 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:13946263-13946779 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:13984208-13984392 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:13987981-13988481 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:14013273-14014244 Neighboring gene uncharacterized LOC105376425 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 3068 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:14073952-14074117 Neighboring gene uncharacterized LOC101928453

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043265.1 

    Range
    101..479
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    13870797..13871175
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    13883877..13884257
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases