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COX6CP10 cytochrome c oxidase subunit 6C pseudogene 10 [ Homo sapiens (human) ]

Gene ID: 106481681, updated on 10-Oct-2023

Summary

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Official Symbol
COX6CP10provided by HGNC
Official Full Name
cytochrome c oxidase subunit 6C pseudogene 10provided by HGNC
Primary source
HGNC:HGNC:49362
See related
AllianceGenome:HGNC:49362
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (33554571..33554989)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (33555426..33555844)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (33596063..33596481)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124909363 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:33487995-33488496 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:33489631-33490130 Neighboring gene NANOG hESC enhancer GRCh37_chr3:33504525-33505078 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:33508920-33510119 Neighboring gene RNA, 5S ribosomal pseudogene 128 Neighboring gene cytoplasmic linker associated protein 2 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:33618786-33619296 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:33619297-33619807 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:33620187-33620768 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19650 Neighboring gene MPRA-validated peak4600 silencer Neighboring gene MPRA-validated peak4601 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14191 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19651 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14192 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr3:33830741-33831638 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:33840285-33840818 Neighboring gene SDA1 domain containing 1 pseudogene 3 Neighboring gene PDCD6IP divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • cytochrome c oxidase subunit VIc pseudogene 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043049.2 

    Range
    101..519
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    33554571..33554989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    33555426..33555844
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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