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RNU1-45P RNA, U1 small nuclear 45, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481610, updated on 10-Oct-2023

Summary

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Official Symbol
RNU1-45Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 45, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48387
See related
Ensembl:ENSG00000253000 AllianceGenome:HGNC:48387
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q34.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (178116721..178116861, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (181455368..181455508, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (179037875..179038015, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1098 Neighboring gene uncharacterized LOC124900914 Neighboring gene long intergenic non-protein coding RNA 1099 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:178782433-178782948 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:178782949-178783464 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_76370 Neighboring gene MPRA-validated peak5154 silencer Neighboring gene uncharacterized LOC105377561 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:178936561-178937125 Neighboring gene Sharpr-MPRA regulatory region 9086 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:179026293-179027085 Neighboring gene uncharacterized LOC105377562 Neighboring gene ribosomal protein L19 pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044505.1 

    Range
    101..241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    178116721..178116861 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    181455368..181455508 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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