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RNU6-1270P RNA, U6 small nuclear 1270, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481581, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1270Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1270, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48233
See related
Ensembl:ENSG00000252937 AllianceGenome:HGNC:48233
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (73241789..73241896, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (73283266..73283373, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (73290940..73291047, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107986098 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:73160026-73160587 Neighboring gene RNA, U2 small nuclear 64, pseudogene Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:73213631-73214237 Neighboring gene Sharpr-MPRA regulatory region 9383 Neighboring gene GPATCH11 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:73343679-73344179 Neighboring gene PDZ domain containing ring finger 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20099 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:73533722-73534255 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20101 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20102 Neighboring gene uncharacterized LOC101927296 Neighboring gene RNA, U7 small nuclear 119 pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044269.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    73241789..73241896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    73283266..73283373 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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