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RNU6-1187P RNA, U6 small nuclear 1187, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481554, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1187Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1187, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48150
See related
Ensembl:ENSG00000201641 AllianceGenome:HGNC:48150
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q21.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (77150328..77150437, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (80491122..80491231, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (78071481..78071590, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L7 pseudogene 17 Neighboring gene ubiquitin family domain containing 1 pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21637 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15501 Neighboring gene uncharacterized LOC101928864 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15502 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15503 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15504 Neighboring gene cyclin G2 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr4:78095614-78096260 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr4:78096261-78096907 Neighboring gene uncharacterized LOC107986292

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044059.1 

    Range
    101..210
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    77150328..77150437 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    80491122..80491231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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