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RNU6-1015P RNA, U6 small nuclear 1015, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481501, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1015Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1015, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47978
See related
Ensembl:ENSG00000252930 AllianceGenome:HGNC:47978
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-1015P in Genome Data Viewer
Location:
Xq23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (112919132..112919230)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (111370979..111371077)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (112162360..112162458)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107985651 Neighboring gene NANOG hESC enhancer GRCh37_chrX:112094284-112095066 Neighboring gene RNA, 7SL, cytoplasmic 266, pseudogene Neighboring gene NANOG hESC enhancer GRCh37_chrX:112180402-112180965 Neighboring gene uncharacterized LOC124905274 Neighboring gene uncharacterized LOC101928437 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:112331023-112331523 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:112351918-112352418 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chrX:112352419-112352919 Neighboring gene MED14-independent group 3 enhancer GRCh37_chrX:112516938-112518137 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:112549954-112550454 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:112644353-112645154 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:112646849-112647350

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043668.1 

    Range
    101..199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    112919132..112919230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    111370979..111371077
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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