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RNU6-983P RNA, U6 small nuclear 983, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481490, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-983Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 983, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47946
See related
Ensembl:ENSG00000251813 AllianceGenome:HGNC:47946
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-983P in Genome Data Viewer
Location:
1q31.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (194488103..194488205, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (193834298..193834400, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (194457233..194457335, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124904475 Neighboring gene uncharacterized LOC107985242 Neighboring gene MPRA-validated peak610 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr1:194237985-194238486 Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 14 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2273 Neighboring gene MPRA-validated peak612 silencer Neighboring gene uncharacterized LOC105371670 Neighboring gene MPRA-validated peak613 silencer Neighboring gene MPRA-validated peak614 silencer Neighboring gene MPRA-validated peak616 silencer Neighboring gene MPRA-validated peak617 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:194827800-194828304 Neighboring gene MPRA-validated peak621 silencer Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:195065497-195066109 Neighboring gene MPRA-validated peak624 silencer Neighboring gene MPRA-validated peak625 silencer Neighboring gene MPRA-validated peak626 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr1:195305658-195306186 Neighboring gene uncharacterized LOC107985458 Neighboring gene MPRA-validated peak630 silencer Neighboring gene MPRA-validated peak631 silencer Neighboring gene uncharacterized LOC105371671 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1658 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:195689645-195690174

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043588.1 

    Range
    101..203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    194488103..194488205 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    193834298..193834400 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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