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RNU6-894P RNA, U6 small nuclear 894, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481461, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-894Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 894, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47857
See related
Ensembl:ENSG00000252903 AllianceGenome:HGNC:47857
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
Xp21.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (31348192..31348296)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (30946348..30946452)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (31366309..31366413)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20727 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29510 Neighboring gene TAB3 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29511 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29512 Neighboring gene TGF-beta activated kinase 1 (MAP3K7) binding protein 3 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29513 Neighboring gene Sharpr-MPRA regulatory region 11226 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20728 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29514 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20729 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29516 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 29515 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 20730 Neighboring gene ferritin heavy chain like 17 Neighboring gene Sharpr-MPRA regulatory region 5644 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:31436711-31437315 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chrX:31437316-31437919 Neighboring gene uncharacterized LOC124905175 Neighboring gene dystrophin Neighboring gene NANOG hESC enhancer GRCh37_chrX:31453682-31454192 Neighboring gene MPRA-validated peak7373 silencer Neighboring gene RNA, 5S ribosomal pseudogene 501

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043354.1 

    Range
    101..205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    31348192..31348296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    30946348..30946452
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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