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RNU6-774P RNA, U6 small nuclear 774, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481425, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-774Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 774, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47737
See related
Ensembl:ENSG00000200108 AllianceGenome:HGNC:47737
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q21.23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (84233657..84233763)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (87563618..87563724)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (85154810..85154916)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr4:84469077-84470276 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 15543 Neighboring gene Sharpr-MPRA regulatory region 7334 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr4:84539256-84540455 Neighboring gene glycerol-3-phosphate acyltransferase 3 Neighboring gene Sharpr-MPRA regulatory region 4612 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:84557857-84558358 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21689 Neighboring gene VISTA enhancer hs712 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:84702313-84703031 Neighboring gene uncharacterized LOC105377315 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:84771005-84771616 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:84771617-84772228 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr4:84775825-84777024 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:84843248-84843790 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:84843791-84844331 Neighboring gene NANOG hESC enhancer GRCh37_chr4:84917176-84917884 Neighboring gene long intergenic non-protein coding RNA 2994 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:85048206-85048769 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:85165003-85165976 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:85165977-85166950 Neighboring gene heart enhancer 9 Neighboring gene PLAG1 like zinc finger 2 pseudogene Neighboring gene VISTA enhancer hs680 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85257789-85258318 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85258319-85258846 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:85263663-85264162 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:85283860-85284085 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85299952-85300636 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr4:85306108-85306821 Neighboring gene NANOG hESC enhancer GRCh37_chr4:85334758-85335365 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:85402785-85403285 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:85404850-85405688 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:85413525-85414416 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:85416773-85417273 Neighboring gene NK6 homeobox 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043048.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    84233657..84233763
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    87563618..87563724
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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