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RNU6-729P RNA, U6 small nuclear 729, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481410, updated on 8-Nov-2023

Summary

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Official Symbol
RNU6-729Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 729, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47692
See related
Ensembl:ENSG00000207128 AllianceGenome:HGNC:47692
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8p23.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (10476223..10476329)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (9262832..9262938, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (10333733..10333839)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene methionine sulfoxide reductase A Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:10194133-10194989 Neighboring gene transmembrane protein 126A pseudogene Neighboring gene ReSE screen-validated silencer GRCh37_chr8:10214030-10214233 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10273265-10274127 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:10275622-10276144 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10280427-10280927 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10282861-10283372 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10283373-10283882 Neighboring gene uncharacterized LOC124901887 Neighboring gene long intergenic non-protein coding RNA 3022 Neighboring gene serine protease 52, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid active region 26992 Neighboring gene serine protease 51 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:10382638-10383436 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:10406483-10407477 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:10412556-10413270 Neighboring gene serine protease 55 Neighboring gene uncharacterized LOC105379237

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042918.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    10476223..10476329
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_018654717.1 Reference GRCh38.p14 PATCHES

    Range
    2870680..2870786 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    9262832..9262938 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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