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RNU6-690P RNA, U6 small nuclear 690, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481398, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-690Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 690, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47653
See related
Ensembl:ENSG00000202112 AllianceGenome:HGNC:47653
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q22.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (95599114..95599219)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (96724269..96724374)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (96611342..96611447)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27655 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:96281415-96282054 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27656 Neighboring gene CFAP418 antisense RNA 1 Neighboring gene tRNA-Ser (anticodon AGA) 2-5 Neighboring gene cilia and flagella associated protein 418 Neighboring gene NANOG hESC enhancer GRCh37_chr8:96398681-96399258 Neighboring gene NANOG hESC enhancer GRCh37_chr8:96442743-96443274 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:96478176-96479375 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:96570145-96570805 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:96693685-96694212 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:96694213-96694738 Neighboring gene uncharacterized LOC107986957 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27657 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27658 Neighboring gene SRSF3 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_046013.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    95599114..95599219
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    96724269..96724374
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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