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RNU6-668P RNA, U6 small nuclear 668, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481393, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-668Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 668, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47631
See related
Ensembl:ENSG00000201050 AllianceGenome:HGNC:47631
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4q32.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (164787290..164787396)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (168134983..168135089)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (165708442..165708548)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene RNA, U6 small nuclear 284, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:165597429-165597929 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_75752 Neighboring gene CHORDC1 pseudogene 3 Neighboring gene MPRA-validated peak5145 silencer Neighboring gene small integral membrane protein 31 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:165720294-165720912 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr4:165720913-165721532 Neighboring gene H3K27ac hESC enhancer GRCh37_chr4:165794162-165794662 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 22107 Neighboring gene apelin receptor early endogenous ligand Neighboring gene tripartite motif containing 60 pseudogene 14

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045996.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    164787290..164787396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    168134983..168135089
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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