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RNU6-565P RNA, U6 small nuclear 565, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481360, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-565Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 565, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47528
See related
Ensembl:ENSG00000222869 AllianceGenome:HGNC:47528
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
7p14.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (37351143..37351242)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (37491855..37491954)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (37390747..37390846)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene engulfment and cell motility 1 Neighboring gene NANOG hESC enhancer GRCh37_chr7:37156919-37157420 Neighboring gene ribosomal protein S17 pseudogene 13 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr7:37193283-37193902 Neighboring gene small nucleolar RNA U13 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25852 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:37243623-37244822 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:37287752-37288372 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:37288373-37288992 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:37318405-37318906 Neighboring gene H3K27ac hESC enhancer GRCh37_chr7:37318907-37319406 Neighboring gene Sharpr-MPRA regulatory region 7000 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25853 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25854 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:37392751-37393252 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr7:37393979-37395178 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr7:37415805-37417004 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 25858 Neighboring gene ribosomal protein S10 pseudogene 14 Neighboring gene uncharacterized LOC124900242

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044552.1 

    Range
    101..200
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    37351143..37351242
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    37491855..37491954
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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