U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNU6-550P RNA, U6 small nuclear 550, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481355, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
RNU6-550Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 550, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47513
See related
Ensembl:ENSG00000212359 AllianceGenome:HGNC:47513
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
4q27
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (120810469..120810569)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (124114669..124114769)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (121731624..121731724)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene secretion associated Ras related GTPase 1A pseudogene 3 Neighboring gene uncharacterized LOC124900771 Neighboring gene Sharpr-MPRA regulatory region 8715 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72414 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72419 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72528 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21861 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121655223-121655429 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:121662741-121663307 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:121662174-121662740 Neighboring gene PR/SET domain 5 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 21862 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72556 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72587 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72607 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_72637 Neighboring gene ReSE screen-validated silencer GRCh37_chr4:121806618-121806798 Neighboring gene uncharacterized LOC105377399 Neighboring gene SET pseudogene 12

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

Go to the top of the page Help

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044515.1 

    Range
    101..201
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    120810469..120810569
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    124114669..124114769
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases