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RNU6-384P RNA, U6 small nuclear 384, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481299, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-384Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 384, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47347
See related
Ensembl:ENSG00000201770 AllianceGenome:HGNC:47347
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
20q11.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (31581089..31581192)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (33305320..33305423)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (30168892..30168995)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene histocompatibility minor 13 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr20:30134937-30136136 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:30137639-30138140 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:30138141-30138640 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30142553-30143052 Neighboring gene MCTS family member 2 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr20:30148388-30149587 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:30153591-30154466 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:30154467-30155342 Neighboring gene Sharpr-MPRA regulatory region 9809 Neighboring gene HM13 antisense RNA 1 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30160423-30160964 Neighboring gene uncharacterized LOC107985416 Neighboring gene ReSE screen-validated silencer GRCh37_chr20:30162848-30163017 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr20:30172998-30173500 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr20:30173501-30174004 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30175011-30175512 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr20:30178306-30178806 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr20:30178807-30179307 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30180469-30181234 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30182001-30182766 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancers GRCh37_chr20:30182767-30183531 and GRCh37_chr20:30183532-30184297 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30185063-30185828 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30185829-30186593 Neighboring gene Sharpr-MPRA regulatory region 14532 Neighboring gene VISTA enhancer hs480 Neighboring gene uncharacterized LOC105372588 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30192859-30193529 Neighboring gene H3K27ac hESC enhancer GRCh37_chr20:30193530-30194199 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:30194246-30194824 Neighboring gene inhibitor of DNA binding 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044068.1 

    Range
    101..204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    31581089..31581192
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    33305320..33305423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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