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RNU6-287P RNA, U6 small nuclear 287, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481269, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-287Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 287, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47250
See related
Ensembl:ENSG00000252039 AllianceGenome:HGNC:47250
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-287P in Genome Data Viewer
Location:
17q21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 17 NC_000017.11 (42891338..42891435, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 17 NC_060941.1 (43748481..43748578, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 17 NC_000017.10 (41043355..41043452, complement)

Chromosome 17 - NC_000017.11Genomic Context describing neighboring genes Neighboring gene amine oxidase copper containing 3 Neighboring gene amine oxidase copper containing 4, pseudogene Neighboring gene H3K4me1 hESC enhancer GRCh37_chr17:41029817-41030346 Neighboring gene long intergenic non-protein coding RNA 671 Neighboring gene HNF1 motif-containing MPRA enhancer 258 Neighboring gene glucose-6-phosphatase catalytic subunit 1 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr17:41069082-41069840 Neighboring gene H3K27ac hESC enhancer GRCh37_chr17:41080466-41081042 Neighboring gene RNY4 pseudogene 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045602.1 

    Range
    101..198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000017.11 Reference GRCh38.p14 Primary Assembly

    Range
    42891338..42891435 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060941.1 Alternate T2T-CHM13v2.0

    Range
    43748481..43748578 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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