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RNU6-217P RNA, U6 small nuclear 217, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481246, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-217Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 217, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47180
See related
Ensembl:ENSG00000206891 AllianceGenome:HGNC:47180
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-217P in Genome Data Viewer
Location:
3p12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (77811741..77811844, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (77866569..77866672, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (77860892..77860995, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene roundabout guidance receptor 2 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:77214086-77214814 Neighboring gene RNA, U6 small nuclear 386, pseudogene Neighboring gene MPRA-validated peak4724 silencer Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:77359951-77361150 Neighboring gene voltage dependent anion channel 1 pseudogene 7 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:77524547-77525070 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr3:77582237-77583436 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:77623115-77624314 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:77735685-77736226 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:77844088-77844666 Neighboring gene uncharacterized LOC105377171 Neighboring gene long intergenic non-protein coding RNA 2077

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043674.1 

    Range
    101..204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    77811741..77811844 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    77866569..77866672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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