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RNU6-130P RNA, U6 small nuclear 130, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481218, updated on 8-Nov-2023

Summary

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Official Symbol
RNU6-130Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 130, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47093
See related
Ensembl:ENSG00000223044 AllianceGenome:HGNC:47093
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-130P in Genome Data Viewer
Location:
6q14.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (82210338..82210440, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (83419733..83419835, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (82920055..82920157, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 1526 Neighboring gene long intergenic non-protein coding RNA 2542 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr6:82647366-82648565 Neighboring gene MPRA-validated peak5921 silencer Neighboring gene Sharpr-MPRA regulatory region 11142 Neighboring gene uncharacterized LOC107986617 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 24776 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr6:82853903-82855102 Neighboring gene inhibitor of Bruton tyrosine kinase Neighboring gene MPRA-validated peak5922 silencer Neighboring gene NANOG hESC enhancer GRCh37_chr6:82949825-82950342 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 17353 Neighboring gene single stranded DNA binding protein 2 pseudogene Neighboring gene Sharpr-MPRA regulatory region 1235 Neighboring gene uncharacterized LOC105377874

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045456.1 

    Range
    101..203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    82210338..82210440 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 PATCHES

Genomic

  1. NW_013171802.1 Reference GRCh38.p14 PATCHES

    Range
    69950..70052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    83419733..83419835 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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