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RN7SL870P RNA, 7SL, cytoplasmic 870, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481155, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL870Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 870, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46886
See related
Ensembl:ENSG00000244732 AllianceGenome:HGNC:46886
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p21.31
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (47560229..47560524, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (47579307..47579602, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (47601719..47602014, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:47546017-47546910 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19816 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19817 Neighboring gene bolA family member 2 pseudogene 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19818 Neighboring gene elongator acetyltransferase complex subunit 6 Neighboring gene uncharacterized LOC105377074 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:47584435-47584935 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:47613774-47614274 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:47614275-47614775 Neighboring gene Sharpr-MPRA regulatory region 12920 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14310 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14311 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14312 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:47620980-47621684 Neighboring gene chondroitin sulfate proteoglycan 5 Neighboring gene uncharacterized LOC124906234 Neighboring gene SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042927.1 

    Range
    101..396
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    47560229..47560524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    47579307..47579602 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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