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RN7SL583P RNA, 7SL, cytoplasmic 583, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481082, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL583Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 583, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46599
See related
Ensembl:ENSG00000239504 AllianceGenome:HGNC:46599
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1p22.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (88477828..88478114, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (88321329..88321615, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (88943511..88943797, complement)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101927871 Neighboring gene uncharacterized LOC105378836 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:88433977-88434478 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:88434479-88434978 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr1:88439514-88440031 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr1:88500769-88501968 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:88503107-88503807 Neighboring gene VISTA enhancer hs1198 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:88553815-88554316 Neighboring gene VISTA enhancer hs878 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:88641175-88642374 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1050 Neighboring gene VISTA enhancer hs1107 Neighboring gene NANOG hESC enhancer GRCh37_chr1:88761804-88762778 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:88807244-88807797 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 1289 Neighboring gene VISTA enhancer hs327 Neighboring gene uncharacterized LOC105378839 Neighboring gene PKN2 antisense RNA 1 Neighboring gene ribosomal protein L36a pseudogene 10 Neighboring gene uncharacterized LOC105378838

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044378.1 

    Range
    101..387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    88477828..88478114 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    88321329..88321615 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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