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RN7SL288P RNA, 7SL, cytoplasmic 288, pseudogene [ Homo sapiens (human) ]

Gene ID: 106481000, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL288Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 288, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46304
See related
Ensembl:ENSG00000240767 AllianceGenome:HGNC:46304
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
13q14.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 13 NC_000013.11 (46169458..46169744, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 13 NC_060937.1 (45390467..45390753, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 13 NC_000013.10 (46743593..46743879, complement)

Chromosome 13 - NC_000013.11Genomic Context describing neighboring genes Neighboring gene zinc finger CCCH-type containing 13 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:46626065-46626601 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr13:46626602-46627137 Neighboring gene CPB2 antisense RNA 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7686 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7687 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7688 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr13:46660879-46661378 Neighboring gene carboxypeptidase B2 Neighboring gene Sharpr-MPRA regulatory region 4806 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7689 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7690 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr13:46724131-46725330 Neighboring gene lymphocyte cytosolic protein 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7691 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7692 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 7693 Neighboring gene uncharacterized LOC107984578 Neighboring gene uncharacterized LOC105370192 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 5319 Neighboring gene small nucleolar RNA U13 Neighboring gene leucine rich repeat containing 63

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045562.1 

    Range
    101..387
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000013.11 Reference GRCh38.p14 Primary Assembly

    Range
    46169458..46169744 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060937.1 Alternate T2T-CHM13v2.0

    Range
    45390467..45390753 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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