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RN7SL284P RNA, 7SL, cytoplasmic 284, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480999, updated on 8-Nov-2023

Summary

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Official Symbol
RN7SL284Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 284, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46300
See related
Ensembl:ENSG00000243446 AllianceGenome:HGNC:46300
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
10q22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 10 NC_000010.11 (77912271..77912545, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 10 NC_060934.1 (78781316..78781590, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 10 NC_000010.10 (79672029..79672303, complement)

Chromosome 10 - NC_000010.11Genomic Context describing neighboring genes Neighboring gene inosine monophosphate dehydrogenase 1 pseudogene 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:79568517-79569016 Neighboring gene discs large MAGUK scaffold protein 5 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:79591709-79592210 Neighboring gene H3K27ac hESC enhancer GRCh37_chr10:79592211-79592710 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:79596052-79596324 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:79596746-79597366 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:79601269-79601770 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:79613571-79614072 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:79614073-79614572 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79616089-79616612 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79616613-79617136 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79623439-79624198 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79625716-79626473 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr10:79627013-79628212 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79637563-79638502 Neighboring gene Sharpr-MPRA regulatory region 8551 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr10:79649557-79650232 Neighboring gene uncharacterized LOC101929347 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79651583-79652256 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79660915-79661442 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79661443-79661970 Neighboring gene Sharpr-MPRA regulatory region 4447 Neighboring gene NFE2L2 motif-containing MPRA enhancers 69 and 123 Neighboring gene Sharpr-MPRA regulatory region 2984 Neighboring gene ReSE screen-validated silencer GRCh37_chr10:79688206-79688382 Neighboring gene DLG5 antisense RNA 1 Neighboring gene Sharpr-MPRA regulatory region 2866 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr10:79707975-79708512 Neighboring gene H3K27ac-H3K4me1 hESC enhancers GRCh37_chr10:79708513-79709050 and GRCh37_chr10:79709051-79709588 Neighboring gene H2A.Z histone pseudogene 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045558.1 

    Range
    101..375
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000010.11 Reference GRCh38.p14 Primary Assembly

    Range
    77912271..77912545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060934.1 Alternate T2T-CHM13v2.0

    Range
    78781316..78781590 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases