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RN7SL18P RNA, 7SL, cytoplasmic 18, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480927, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL18Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 18, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46034
See related
Ensembl:ENSG00000241625 AllianceGenome:HGNC:46034
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2p15
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (62491178..62491468)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (62497500..62497790)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (62718313..62718603)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374761 Neighboring gene small nucleolar RNA U13 Neighboring gene Sharpr-MPRA regulatory region 11227 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:62523719-62524218 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15851 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15852 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:62532419-62532946 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:62532947-62533472 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15855 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15856 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15857 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15858 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15859 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:62552835-62554034 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15860 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:62589276-62589776 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:62589777-62590277 Neighboring gene NANOG hESC enhancer GRCh37_chr2:62601400-62601986 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15861 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15862 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15863 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:62638109-62638868 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15864 Neighboring gene uncharacterized LOC105374764 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15865 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 15866 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11537 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:62702751-62703483 Neighboring gene transmembrane protein 17 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:62728217-62729416 Neighboring gene Sharpr-MPRA regulatory region 12243 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11538 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 11539 Neighboring gene ribosomal protein L37 pseudogene 13 Neighboring gene ribosomal protein L21 pseudogene 37

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045024.1 

    Range
    101..391
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    62491178..62491468
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    62497500..62497790
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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