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RN7SKP226 RN7SK pseudogene 226 [ Homo sapiens (human) ]

Gene ID: 106480903, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP226provided by HGNC
Official Full Name
RN7SK pseudogene 226provided by HGNC
Primary source
HGNC:HGNC:45950
See related
Ensembl:ENSG00000201782 AllianceGenome:HGNC:45950
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q24.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (128220504..128220752)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (129348176..129348424)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (129232750..129232998)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124902020 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:129179416-129180615 Neighboring gene Sharpr-MPRA regulatory region 6197 Neighboring gene microRNA 1208 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19537 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27960 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27961 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:129325755-129326438 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:129327123-129327805 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:129356185-129356773 Neighboring gene NANOG hESC enhancer GRCh37_chr8:129374035-129374655 Neighboring gene long intergenic non-protein coding RNA 824 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr8:129566785-129567984 Neighboring gene NFE2L2 motif-containing MPRA enhancer 33 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:129624320-129625140 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:129757123-129757729 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:129780448-129781388 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr8:129799489-129800688 Neighboring gene uncharacterized LOC124902021

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 226

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042958.1 

    Range
    101..349
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    128220504..128220752
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    129348176..129348424
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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