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RNU7-169P RNA, U7 small nuclear 169 pseudogene [ Homo sapiens (human) ]

Gene ID: 106480827, updated on 10-Oct-2023

Summary

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Official Symbol
RNU7-169Pprovided by HGNC
Official Full Name
RNA, U7 small nuclear 169 pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:45703
See related
Ensembl:ENSG00000238457 AllianceGenome:HGNC:45703
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
12q24.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (108668448..108668508)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (108643024..108643084)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (109062224..109062284)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105369968 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6972 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6973 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4830 Neighboring gene selectin P ligand Neighboring gene microRNA 4496 Neighboring gene coronin 1C Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6974 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:109085249-109085930 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:109085931-109086612 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:109087326-109087838 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6976 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:109095295-109095827 Neighboring gene Sharpr-MPRA regulatory region 4572 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6977 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:109108143-109108833 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr12:109108834-109109524 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr12:109109525-109110214 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4831 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:109125165-109125968 Neighboring gene uncharacterized LOC105369969 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:109128377-109128878 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 4833 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:109164153-109164653 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 6978 Neighboring gene small nucleolar RNA SNORA40 Neighboring gene slingshot protein phosphatase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044387.1 

    Range
    101..161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    108668448..108668508
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    108643024..108643084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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