U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TRMT112P5 tRNA methyltransferase subunit 11-2 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 106480784, updated on 10-Oct-2023

Summary

Go to the top of the page Help
Official Symbol
TRMT112P5provided by HGNC
Official Full Name
tRNA methyltransferase subunit 11-2 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:44024
See related
Ensembl:ENSG00000250161 AllianceGenome:HGNC:44024
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
3q23
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (139845078..139845411, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (142592472..142592805, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (139563920..139564253, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20615 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:139326683-139327202 Neighboring gene RN7SK pseudogene 124 Neighboring gene nicotinamide nucleotide adenylyltransferase 3 Neighboring gene RNA, 7SL, cytoplasmic 724, pseudogene Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14769 Neighboring gene Sharpr-MPRA regulatory region 1318 Neighboring gene MPRA-validated peak4849 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14770 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14771 Neighboring gene calsyntenin 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20616 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:139917505-139918704 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:139922884-139923456 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:139923457-139924028 Neighboring gene uncharacterized LOC124909440 Neighboring gene NANOG hESC enhancer GRCh37_chr3:139984181-139984682 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:140017275-140017955 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:140059844-140060451 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:140060452-140061058 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:140105082-140106281 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:140141804-140143003 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:140143411-140144295 Neighboring gene uncharacterized LOC124900599

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Phenotypes

Go to the top of the page Help

Review eQTL and phenotype association data in this region using PheGenI

Variation

Go to the top of the page Help

See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

Go to the top of the page Help

Other Names

  • tRNA methyltransferase 11-2 homolog pseudogene 5

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044040.1 

    Range
    101..434
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    139845078..139845411 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    142592472..142592805 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases