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RNA5SP134 RNA, 5S ribosomal pseudogene 134 [ Homo sapiens (human) ]

Gene ID: 106480756, updated on 10-Oct-2023

Summary

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Official Symbol
RNA5SP134provided by HGNC
Official Full Name
RNA, 5S ribosomal pseudogene 134provided by HGNC
Primary source
HGNC:HGNC:43034
See related
Ensembl:ENSG00000252301 AllianceGenome:HGNC:43034
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
RN5S134
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Genomic context

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See RNA5SP134 in Genome Data Viewer
Location:
3p14.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (63545440..63545520)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (63589056..63589136)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (63531116..63531196)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene long intergenic non-protein coding RNA 698 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:63121623-63122228 Neighboring gene NANOG hESC enhancer GRCh37_chr3:63152724-63153255 Neighboring gene ubiquitin like 5 pseudogene 3 Neighboring gene synaptoporin Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:63329277-63329919 Neighboring gene NANOG hESC enhancer GRCh37_chr3:63429870-63430414 Neighboring gene SYNPR antisense RNA 1 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:63562463-63562990 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:63631069-63631622 Neighboring gene NANOG hESC enhancer GRCh37_chr3:63637673-63638197 Neighboring gene VISTA enhancer hs1387 Neighboring gene uncharacterized LOC105377119 Neighboring gene sentan, cilia apical structure protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 5S ribosomal 134

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045596.1 

    Range
    101..181
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    63545440..63545520
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    63589056..63589136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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