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RNU6-869P RNA, U6 small nuclear 869, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480616, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-869Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 869, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47832
See related
Ensembl:ENSG00000207138 AllianceGenome:HGNC:47832
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q24.21
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (126504763..126504868)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (127631903..127632008)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (127517008..127517113)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ret finger protein like 4A pseudogene 5 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:127267275-127267436 Neighboring gene NANOG hESC enhancer GRCh37_chr8:127296381-127296887 Neighboring gene uncharacterized LOC101927657 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr8:127384477-127385018 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:127412538-127413039 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:127422275-127422836 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:127433559-127434060 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr8:127445690-127446889 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:127460795-127461604 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:127462415-127463224 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:127461605-127462414 Neighboring gene uncharacterized LOC105375750 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:127534858-127535674 Neighboring gene MPRA-validated peak7170 silencer Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:127559131-127559886 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:127564099-127564608 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19521 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27929 Neighboring gene uncharacterized LOC105375751 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:127570125-127570961 Neighboring gene LRAT domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044746.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    126504763..126504868
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    127631903..127632008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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