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RNU6-147P RNA, U6 small nuclear 147, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480556, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-147Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 147, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47110
See related
Ensembl:ENSG00000206710 AllianceGenome:HGNC:47110
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
20q13.13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 20 NC_000020.11 (49972106..49972212)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 20 NC_060944.1 (51741582..51741688)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 20 NC_000020.10 (48588643..48588749)

Chromosome 20 - NC_000020.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U13 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_60738 Neighboring gene ring finger protein 114 Neighboring gene Sharpr-MPRA regulatory region 11781 Neighboring gene keratin 18 pseudogene 4 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_60755 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:48582740-48583331 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:48583332-48583922 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13009 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13010 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:48597922-48598859 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 13011 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:48606199-48606951 Neighboring gene snail family transcriptional repressor 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18079 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 18080 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr20:48632321-48633048 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:48643875-48644714 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:48644715-48645552 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr20:48646392-48647229 Neighboring gene SNAI1 cis-regulatory eRNA expressed in monocytes 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044257.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000020.11 Reference GRCh38.p14 Primary Assembly

    Range
    49972106..49972212
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060944.1 Alternate T2T-CHM13v2.0

    Range
    51741582..51741688
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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