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RN7SKP165 RN7SK pseudogene 165 [ Homo sapiens (human) ]

Gene ID: 106480367, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SKP165provided by HGNC
Official Full Name
RN7SK pseudogene 165provided by HGNC
Primary source
HGNC:HGNC:45889
See related
AllianceGenome:HGNC:45889
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1q42.12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (226445938..226446171)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (225634041..225634274)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (226633639..226633872)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2648 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2649 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2650 Neighboring gene poly(ADP-ribose) polymerase 1 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr1:226566810-226568009 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:226590629-226591530 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2651 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1883 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1884 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2652 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226596389 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226598652 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226602286 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226602556 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226603897 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 1:226605227 Neighboring gene NANOG hESC enhancer GRCh37_chr1:226605841-226606392 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 1885 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226616591-226617472 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:226620366-226621218 Neighboring gene RPS3A pseudogene 7 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:226642758-226642965 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:226672850-226673020 Neighboring gene CDKN2A interacting protein N-terminal like pseudogene 1 Neighboring gene ReSE screen-validated silencer GRCh37_chr1:226685292-226685469 Neighboring gene uncharacterized LOC105373115 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr1:226707962-226708656

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • RNA, 7SK small nuclear pseudogene 165

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044804.1 

    Range
    101..334
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    226445938..226446171
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    225634041..225634274
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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