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MTCO1P5 MT-CO1 pseudogene 5 [ Homo sapiens (human) ]

Gene ID: 106480318, updated on 10-Oct-2023

Summary

Official Symbol
MTCO1P5provided by HGNC
Official Full Name
MT-CO1 pseudogene 5provided by HGNC
Primary source
HGNC:HGNC:51300
See related
Ensembl:ENSG00000233026 AllianceGenome:HGNC:51300
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

See MTCO1P5 in Genome Data Viewer
Location:
3p25.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (12165299..12165642, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (12163539..12163882, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (12206799..12207142, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene synapsin II Neighboring gene actin gamma 1 pseudogene 12 Neighboring gene Sharpr-MPRA regulatory region 15359 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19435 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14064 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:12219651-12220850 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19437 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19436 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19438 Neighboring gene TIMP metallopeptidase inhibitor 4 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:12265535-12266263 Neighboring gene glutathione S-transferase mu 5 pseudogene 1 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:12328552-12329130 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:12348453-12348660 Neighboring gene peroxisome proliferator activated receptor gamma Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:12386163-12387362 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19439 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19440 Neighboring gene PPARG eExon liver enhancer

Genomic regions, transcripts, and products

General gene information

Other Names

  • AC026166.2-001
  • mitochondrially encoded cytochrome c oxidase I pseudogene 5

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044410.1 

    Range
    101..444
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    12165299..12165642 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    12163539..12163882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)