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HSPE1P9 heat shock protein family E (Hsp10) member 1 pseudogene 9 [ Homo sapiens (human) ]

Gene ID: 106480255, updated on 10-Oct-2023

Summary

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Official Symbol
HSPE1P9provided by HGNC
Official Full Name
heat shock protein family E (Hsp10) member 1 pseudogene 9provided by HGNC
Primary source
HGNC:HGNC:49328
See related
AllianceGenome:HGNC:49328
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
2q37.1
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (234455033..234455836, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (234944197..234945000, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (235363677..235364480, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein S20 pseudogene 12 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr2:235271392-235272591 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:235276379-235276880 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:235276881-235277380 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:235311534-235312034 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr2:235336101-235337300 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr2:235339493-235340044 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17354 Neighboring gene long intergenic non-protein coding RNA 1891 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12473 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 12474 Neighboring gene H3K27ac hESC enhancer GRCh37_chr2:235405987-235406760 Neighboring gene CRISPRi-validated cis-regulatory element chr2.7113 Neighboring gene ADP ribosylation factor like GTPase 4C Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr2:235471377-235472120 Neighboring gene uncharacterized LOC105373936 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:235505034-235505574 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:235505575-235506115 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr2:235512165-235513116 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr2:235531433-235532632

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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Other Names

  • heat shock 10kDa protein 1 pseudogene 9

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045108.2 

    Range
    101..904
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    234455033..234455836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    234944197..234945000 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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