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RAP2CP1 RAP2C pseudogene 1 [ Homo sapiens (human) ]

Gene ID: 106480249, updated on 16-Jan-2024

Summary

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Official Symbol
RAP2CP1provided by HGNC
Official Full Name
RAP2C pseudogene 1provided by HGNC
Primary source
HGNC:HGNC:49146
See related
Ensembl:ENSG00000293156 AllianceGenome:HGNC:49146
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
14q32.32
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (103279223..103279955)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (97515252..97515984)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (103745560..103746292)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC124903391 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103692850-103693350 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103693351-103693851 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:103709896-103711095 Neighboring gene ribosomal protein L21 pseudogene 13 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:103731158-103731940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103747748-103748546 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103748547-103749344 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103753471-103754274 Neighboring gene ribosomal protein L17 pseudogene 4 Neighboring gene uncharacterized LOC105370686 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:103768183-103768683 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr14:103777212-103778188 Neighboring gene CRISPRi-validated cis-regulatory element chr14.2493

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043873.1 

    Range
    101..833
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    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    103279223..103279955
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    97515252..97515984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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