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RNU1-115P RNA, U1 small nuclear 115, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480188, updated on 10-Oct-2023

Summary

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Official Symbol
RNU1-115Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 115, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48457
See related
Ensembl:ENSG00000202199 AllianceGenome:HGNC:48457
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU1-115P in Genome Data Viewer
Location:
Xq26.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) X NC_000023.11 (133238657..133238816, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) X NC_060947.1 (131563397..131563556, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) X NC_000023.10 (132372685..132372844, complement)

Chromosome X - NC_000023.11Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORA8 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:132369749-132370574 Neighboring gene NANOG hESC enhancer GRCh37_chrX:132384486-132385069 Neighboring gene transcription factor Dp family member 3 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:132399118-132399641 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:132439404-132439904 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chrX:132440918-132441832 Neighboring gene H3K4me1 hESC enhancer GRCh37_chrX:132446467-132446966 Neighboring gene glypican 4 Neighboring gene NANOG hESC enhancer GRCh37_chrX:132484838-132485339 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:132501328-132501828 Neighboring gene H3K27ac hESC enhancer GRCh37_chrX:132549756-132550256 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chrX:132551379-132551918 Neighboring gene NANOG hESC enhancer GRCh37_chrX:132568407-132568958 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chrX:132571583-132572295 Neighboring gene RNA, U6 small nuclear 203, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043406.1 

    Range
    101..260
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000023.11 Reference GRCh38.p14 Primary Assembly

    Range
    133238657..133238816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060947.1 Alternate T2T-CHM13v2.0

    Range
    131563397..131563556 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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