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RNU1-49P RNA, U1 small nuclear 49, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480162, updated on 10-Oct-2023

Summary

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Official Symbol
RNU1-49Pprovided by HGNC
Official Full Name
RNA, U1 small nuclear 49, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48391
See related
Ensembl:ENSG00000200338 AllianceGenome:HGNC:48391
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
4p13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 4 NC_000004.12 (41771945..41772103, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 4 NC_060928.1 (41745718..41745876, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 4 NC_000004.11 (41773962..41774120, complement)

Chromosome 4 - NC_000004.12Genomic Context describing neighboring genes Neighboring gene olfactory receptor family 5 subfamily M member 14 pseudogene Neighboring gene paired like homeobox 2b polyalanine repeat instability region Neighboring gene PHOX2B antisense RNA 1 Neighboring gene paired like homeobox 2B Neighboring gene Sharpr-MPRA regulatory region 462 Neighboring gene high mobility group box 1 pseudogene 28 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr4:41881826-41882578 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr4:41883331-41884082 Neighboring gene long intergenic non-protein coding RNA 682

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043183.1 

    Range
    101..259
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000004.12 Reference GRCh38.p14 Primary Assembly

    Range
    41771945..41772103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060928.1 Alternate T2T-CHM13v2.0

    Range
    41745718..41745876 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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