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RNU6-1300P RNA, U6 small nuclear 1300, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480134, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1300Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1300, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48263
See related
Ensembl:ENSG00000212348 AllianceGenome:HGNC:48263
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q21.11
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (74048677..74048784)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (74477929..74478036)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (74960912..74961019)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr8:74897195-74897777 Neighboring gene transmembrane protein 70 Neighboring gene ribosomal protein S20 pseudogene 21 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27538 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27539 Neighboring gene DSTN pseudogene 3 Neighboring gene lymphocyte antigen 96 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27540 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19298 Neighboring gene RPS3A pseudogene 32 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:74990404-74990904 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:74990905-74991405 Neighboring gene RNA, U6 small nuclear 1197, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042948.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    74048677..74048784
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    74477929..74478036
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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