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RNU6-1125P RNA, U6 small nuclear 1125, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480061, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-1125Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 1125, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:48088
See related
Ensembl:ENSG00000200471 AllianceGenome:HGNC:48088
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
7p11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 7 NC_000007.14 (54621025..54621131)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 7 NC_060931.1 (54780957..54781063)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 7 NC_000007.13 (54688718..54688824)

Chromosome 7 - NC_000007.14Genomic Context describing neighboring genes Neighboring gene V-set and transmembrane domain containing 2A Neighboring gene VSTM2A overlapping transcript 1 Neighboring gene uncharacterized LOC124901635 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:54731509-54732224 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr7:54732225-54732940 Neighboring gene ribosomal protein L31 pseudogene 35 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:54742531-54743176 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr7:54743177-54743822 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr7:54748033-54748601 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 18184 Neighboring gene SEC61 translocon subunit gamma

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044401.1 

    Range
    101..207
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000007.14 Reference GRCh38.p14 Primary Assembly

    Range
    54621025..54621131
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060931.1 Alternate T2T-CHM13v2.0

    Range
    54780957..54781063
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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