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RNU6-999P RNA, U6 small nuclear 999, pseudogene [ Homo sapiens (human) ]

Gene ID: 106480008, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-999Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 999, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47962
See related
Ensembl:ENSG00000251754 AllianceGenome:HGNC:47962
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1q44
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (245043928..245044032)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (244460579..244460683)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (245207230..245207334)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101928068 Neighboring gene uncharacterized LOC124900416 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:245131334-245131838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2024 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2025 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2026 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2027 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2849 Neighboring gene EF-hand calcium binding domain 2 Neighboring gene uncharacterized LOC107985725 Neighboring gene RNA, U6 small nuclear 1089, pseudogene Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:245209832-245210332 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr1:245210333-245210833 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:245215377-245215878 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr1:245248413-245249612 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:245262289-245262798 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:245262799-245263308 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:245270238-245270738 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr1:245270739-245271239 Neighboring gene uncharacterized LOC124904572 Neighboring gene RNA, U1 small nuclear 132, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045665.1 

    Range
    101..205
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    245043928..245044032
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    244460579..244460683
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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