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RNU6-947P RNA, U6 small nuclear 947, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479985, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-947Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 947, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47910
See related
Ensembl:ENSG00000252073 AllianceGenome:HGNC:47910
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
1q44
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 1 NC_000001.11 (244954858..244954963)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 1 NC_060925.1 (244371521..244371626)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 1 NC_000001.10 (245118160..245118265)

Chromosome 1 - NC_000001.11Genomic Context describing neighboring genes Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:245027219-245028050 Neighboring gene UPF0764 protein C16orf89-like Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:245028051-245028881 Neighboring gene H3K27ac hESC enhancer GRCh37_chr1:245031973-245032572 Neighboring gene heterogeneous nuclear ribonucleoprotein U Neighboring gene MPRA-validated peak809 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2022 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2848 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2023 Neighboring gene RN7SK pseudogene 55 Neighboring gene uncharacterized LOC124900416 Neighboring gene uncharacterized LOC101928068 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr1:245131334-245131838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2024 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2025 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2026 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 2027 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 2849 Neighboring gene EF-hand calcium binding domain 2 Neighboring gene uncharacterized LOC107985725 Neighboring gene RNA, U6 small nuclear 1089, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043818.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000001.11 Reference GRCh38.p14 Primary Assembly

    Range
    244954858..244954963
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060925.1 Alternate T2T-CHM13v2.0

    Range
    244371521..244371626
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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