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RNU6-845P RNA, U6 small nuclear 845, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479940, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-845Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 845, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47808
See related
Ensembl:ENSG00000199448 AllianceGenome:HGNC:47808
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
16q11.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (46556089..46556191, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (52352887..52352989, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (46590001..46590103, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene NANOG hESC enhancer GRCh37_chr16:35201390-35201891 Neighboring gene NANOG hESC enhancer GRCh37_chr16:35273941-35274442 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:35278827-35279374 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:35279375-35279922 Neighboring gene translation initiation factor IF-2-like Neighboring gene protein phosphatase 1 regulatory inhibitor subunit 1A pseudogene 2 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46425779-46426284 Neighboring gene zinc finger and BTB domain containing 14 pseudogene Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46426285-46426789 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46426790-46427296 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46427297-46427802 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46427803-46428308 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46428309-46428813 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46428814-46429320 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46429321-46429825 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:46429826-46430331 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46410251-46410796 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46432011-46432978 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46432979-46433944 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46433945-46434911 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46434912-46435877 Neighboring gene OCT4-NANOG-H3K4me1 hESC enhancer GRCh37_chr16:46453311-46454298 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr16:46455425-46456014 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46607141-46607791 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46419707-46420212 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46416165-46416670 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46416671-46417176 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46417177-46417682 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46417683-46418188 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46418189-46418694 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46418695-46419200 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr16:46419201-46419706 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46424767-46425272 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46420213-46420718 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46420719-46421224 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46421225-46421730 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46421731-46422236 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46422237-46422741 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46422742-46423248 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46423249-46423754 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46423755-46424260 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr16:46424261-46424766 Neighboring gene ankyrin repeat domain 26 pseudogene 1 Neighboring gene RAB31, member RAS oncogene family pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045461.1 

    Range
    101..203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    46556089..46556191 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    52352887..52352989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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