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RNU6-837P RNA, U6 small nuclear 837, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479936, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-837Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 837, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47800
See related
Ensembl:ENSG00000212358 AllianceGenome:HGNC:47800
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
12p12.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 12 NC_000012.12 (17071398..17071505, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 12 NC_060936.1 (16948800..16948907, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (17224332..17224439, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene eukaryotic translation elongation factor 1 alpha 1 pseudogene 16 Neighboring gene VISTA enhancer hs1532 Neighboring gene S-phase kinase associated protein 1 pseudogene 2 Neighboring gene H3K27ac hESC enhancer GRCh37_chr12:17175485-17176027 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr12:17177571-17178072 Neighboring gene NANOG hESC enhancer GRCh37_chr12:17183246-17183747 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 12:17286714 Neighboring gene ribosomal protein L7 pseudogene 40 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 12:17310310 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 12:17311674 Neighboring gene VISTA enhancer hs993 Neighboring gene melanoma risk locus-associated MPRA allelic enhancer 12:17327941 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr12:17485772-17486971 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_26385 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr12:17535474-17536673 Neighboring gene proteasome 26S subunit, ATPase 1 pseudogene 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043439.1 

    Range
    101..208
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p14 Primary Assembly

    Range
    17071398..17071505 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060936.1 Alternate T2T-CHM13v2.0

    Range
    16948800..16948907 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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