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RNU6-822P RNA, U6 small nuclear 822, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479930, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-822Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 822, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47785
See related
Ensembl:ENSG00000199577 AllianceGenome:HGNC:47785
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p24.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (20268965..20269070, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (20272959..20273064, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (20310457..20310562, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19584 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19585 Neighboring gene SGO1 antisense RNA 1 Neighboring gene shugoshin 1 Neighboring gene RNY4 pseudogene 22 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14136 Neighboring gene NANOG hESC enhancer GRCh37_chr3:20312862-20313363 Neighboring gene MPRA-validated peak4563 silencer Neighboring gene MPRA-validated peak4564 silencer Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:20353005-20353506 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:20355404-20355578 Neighboring gene uncharacterized LOC101927829 Neighboring gene MPRA-validated peak4565 silencer Neighboring gene MPRA-validated peak4566 silencer Neighboring gene RNA, U6 small nuclear 815, pseudogene

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043390.1 

    Range
    101..206
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    20268965..20269070 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    20272959..20273064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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