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RNU6-789P RNA, U6 small nuclear 789, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479915, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-789Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 789, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47752
See related
Ensembl:ENSG00000252914 AllianceGenome:HGNC:47752
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q22.3
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (136721394..136721495, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (139462110..139462211, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (136440236..136440337, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene STAG1 cohesin complex component Neighboring gene RNY4 pseudogene 4 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:136344516-136345016 Neighboring gene high mobility group nucleosome binding domain 1 pseudogene 10 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr3:136442929-136443555 Neighboring gene hESC enhancers GRCh37_chr3:136470665-136471596 and GRCh37_chr3:136471597-136472528 Neighboring gene DNAJC8 pseudogene 2 Neighboring gene STAG1 divergent transcript

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045379.1 

    Range
    101..202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    136721394..136721495 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    139462110..139462211 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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