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RNU6-561P RNA, U6 small nuclear 561, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479815, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6-561Pprovided by HGNC
Official Full Name
RNA, U6 small nuclear 561, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:47524
See related
Ensembl:ENSG00000252031 AllianceGenome:HGNC:47524
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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See RNU6-561P in Genome Data Viewer
Location:
2p12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (79636862..79636963, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (79637176..79637277, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (79863988..79864089, complement)

Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene catenin alpha 2 Neighboring gene Neanderthal introgressed variant-containing enhancer experimental_59361 Neighboring gene CTNNA2 antisense RNA 1 Neighboring gene NANOG hESC enhancer GRCh37_chr2:79779842-79780343 Neighboring gene GNA13 pseudogene 1 Neighboring gene microRNA 4264 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:80009037-80009662 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr2:80009663-80010286 Neighboring gene microRNA 8080

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044478.1 

    Range
    101..202
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

    Range
    79636862..79636963 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060926.1 Alternate T2T-CHM13v2.0

    Range
    79637176..79637277 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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