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RNU4-62P RNA, U4 small nuclear 62, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479586, updated on 10-Oct-2023

Summary

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Official Symbol
RNU4-62Pprovided by HGNC
Official Full Name
RNA, U4 small nuclear 62, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46998
See related
Ensembl:ENSG00000222057 AllianceGenome:HGNC:46998
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3q13.33
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (121655475..121655604, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (124375368..124375497, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (121374322..121374451, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr3:121311583-121312782 Neighboring gene MPRA-validated peak4794 silencer Neighboring gene F-box protein 40 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:121333579-121334079 Neighboring gene MPRA-validated peak4795 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20343 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20344 Neighboring gene hematopoietic cell-specific Lyn substrate 1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20345 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20346 Neighboring gene RNA, 7SL, cytoplasmic 172, pseudogene Neighboring gene golgin B1 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr3:121449808-121451007 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20347 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20348 Neighboring gene IQ motif containing B1 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 20349

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_045952.1 

    Range
    101..230
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    121655475..121655604 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    124375368..124375497 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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