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RNU6ATAC28P RNA, U6atac small nuclear 28, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479555, updated on 10-Oct-2023

Summary

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Official Symbol
RNU6ATAC28Pprovided by HGNC
Official Full Name
RNA, U6atac small nuclear 28, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46927
See related
Ensembl:ENSG00000238561 AllianceGenome:HGNC:46927
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
14q31.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 14 NC_000014.9 (83750401..83750499)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 14 NC_060938.1 (77963673..77963771)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 14 NC_000014.8 (84216745..84216843)

Chromosome 14 - NC_000014.9Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107984645 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr14:83691762-83692961 Neighboring gene uncharacterized LOC105370601 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:83922762-83923354 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr14:84093735-84094234 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr14:84172774-84173363 Neighboring gene NANOG hESC enhancer GRCh37_chr14:84293745-84294246 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr14:84327620-84328819 Neighboring gene long intergenic non-protein coding RNA 2305 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr14:84426888-84427764 Neighboring gene NANOG-H3K27ac hESC enhancer GRCh37_chr14:84427765-84428641 Neighboring gene uncharacterized LOC124903401 Neighboring gene CDK7 strongly-dependent group 2 enhancer GRCh37_chr14:84430405-84431604

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044447.1 

    Range
    101..199
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000014.9 Reference GRCh38.p14 Primary Assembly

    Range
    83750401..83750499
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060938.1 Alternate T2T-CHM13v2.0

    Range
    77963673..77963771
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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