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RN7SL493P RNA, 7SL, cytoplasmic 493, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479403, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL493Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 493, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46509
See related
Ensembl:ENSG00000266439 AllianceGenome:HGNC:46509
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
16p13.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 16 NC_000016.10 (10221775..10222073, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 16 NC_060940.1 (10256514..10256812, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 16 NC_000016.9 (10315632..10315930, complement)

Chromosome 16 - NC_000016.10Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit 2A Neighboring gene inosine monophosphate dehydrogenase 1 pseudogene 11 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7189 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7190 Neighboring gene uncharacterized LOC107984900 Neighboring gene uncharacterized LOC105371078 Neighboring gene VISTA enhancer hs1242 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10377 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10378 Neighboring gene MPRA-validated peak2497 silencer Neighboring gene CRISPRi-validated cis-regulatory element chr16.1137 Neighboring gene Sharpr-MPRA regulatory region 5183 Neighboring gene MPRA-validated peak2499 silencer Neighboring gene ATAC-STARR-seq lymphoblastoid active region 10379 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7191 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 7192 Neighboring gene activating transcription factor 7 interacting protein 2 Neighboring gene uncharacterized LOC107984877

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_043268.1 

    Range
    101..399
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000016.10 Reference GRCh38.p14 Primary Assembly

    Range
    10221775..10222073 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060940.1 Alternate T2T-CHM13v2.0

    Range
    10256514..10256812 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases