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RN7SL396P RNA, 7SL, cytoplasmic 396, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479368, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL396Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 396, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46412
See related
AllianceGenome:HGNC:46412
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
8q24.12
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 8 NC_000008.11 (119862665..119862860)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 8 NC_060932.1 (120991503..120991698)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 8 NC_000008.10 (120874905..120875100)

Chromosome 8 - NC_000008.11Genomic Context describing neighboring genes Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27841 Neighboring gene TATA-box binding protein associated factor 2 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27842 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27843 Neighboring gene uncharacterized LOC105375728 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27844 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19483 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr8:120879869-120880370 Neighboring gene DNA replication and sister chromatid cohesion 1 Neighboring gene Sharpr-MPRA regulatory region 238 Neighboring gene H3K27ac hESC enhancer GRCh37_chr8:120886325-120886825 Neighboring gene HNF1 motif-containing MPRA enhancer 57 Neighboring gene DEP domain containing MTOR interacting protein Neighboring gene RNA, 5S ribosomal pseudogene 277 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 19484 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 27848 Neighboring gene ReSE screen-validated silencer GRCh37_chr8:120983071-120983251 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr8:121059845-121060704 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr8:121060705-121061564 Neighboring gene uncharacterized LOC105375730 Neighboring gene MPRA-validated peak7153 silencer

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_042962.1 

    Range
    101..296
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000008.11 Reference GRCh38.p14 Primary Assembly

    Range
    119862665..119862860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060932.1 Alternate T2T-CHM13v2.0

    Range
    120991503..120991698
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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