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RN7SL271P RNA, 7SL, cytoplasmic 271, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479321, updated on 10-Oct-2023

Summary

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Official Symbol
RN7SL271Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 271, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46287
See related
Ensembl:ENSG00000239250 AllianceGenome:HGNC:46287
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p13
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (71827177..71827471)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (71866357..71866651)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (71876328..71876622)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105377156 Neighboring gene prokineticin 2 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71864572-71865144 Neighboring gene NANOG-H3K4me1 hESC enhancer GRCh37_chr3:71865145-71865717 Neighboring gene OCT4-NANOG hESC enhancer GRCh37_chr3:71866364-71867052 Neighboring gene NANOG hESC enhancer GRCh37_chr3:71922109-71922645 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71924591-71925522 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71926453-71927384 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71956813-71957604 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:71970346-71970846 Neighboring gene OCT4-NANOG-H3K27ac hESC enhancer GRCh37_chr3:71974040-71974906 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71974907-71975774 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr3:71976973-71977838 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14523 Neighboring gene ATAC-STARR-seq lymphoblastoid silent region 14524 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:72023234-72023416 Neighboring gene H3K27ac hESC enhancer GRCh37_chr3:72027929-72028603 Neighboring gene P300/CBP strongly-dependent group 1 enhancer GRCh37_chr3:72031234-72032433 Neighboring gene uncharacterized LOC105377157 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:72054171-72054383 Neighboring gene UBE2Q2 pseudogene 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044624.1 

    Range
    101..395
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    71827177..71827471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    71866357..71866651
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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