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RN7SL147P RNA, 7SL, cytoplasmic 147, pseudogene [ Homo sapiens (human) ]

Gene ID: 106479274, updated on 8-Nov-2023

Summary

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Official Symbol
RN7SL147Pprovided by HGNC
Official Full Name
RNA, 7SL, cytoplasmic 147, pseudogeneprovided by HGNC
Primary source
HGNC:HGNC:46163
See related
Ensembl:ENSG00000263988 AllianceGenome:HGNC:46163
Gene type
pseudo
RefSeq status
INFERRED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
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Genomic context

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Location:
3p25.2
Annotation release Status Assembly Chr Location
RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 3 NC_000003.12 (11952788..11953085, complement)
RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 3 NC_060927.1 (11950739..11951036, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 3 NC_000003.11 (11994262..11994559, complement)

Chromosome 3 - NC_000003.12Genomic Context describing neighboring genes Neighboring gene MARK2 pseudogene 20 Neighboring gene MARK2 pseudogene 14 Neighboring gene ReSE screen-validated silencer GRCh37_chr3:12003099-12003242 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:12046587-12047087 Neighboring gene synapsin II Neighboring gene Sharpr-MPRA regulatory region 7614 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr3:12100621-12101122 Neighboring gene actin gamma 1 pseudogene 12 Neighboring gene Sharpr-MPRA regulatory region 15359 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 19435 Neighboring gene TIMP metallopeptidase inhibitor 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Phenotypes

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Review eQTL and phenotype association data in this region using PheGenI

Variation

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See studies and variants in dbVar

See Variation Viewer (GRCh37.p13)

General gene information

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NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

Genomic

  1. NG_044236.1 

    Range
    101..398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000003.12 Reference GRCh38.p14 Primary Assembly

    Range
    11952788..11953085 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Reference GRCh38.p14 ALT_REF_LOCI_1

Genomic

  1. NW_003871060.2 Reference GRCh38.p14 ALT_REF_LOCI_1

    Range
    33413..33710
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060927.1 Alternate T2T-CHM13v2.0

    Range
    11950739..11951036 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

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